Difference between revisions of "Extracting Shoreline Polygons and Polylines from Sentinel-2 Imagery"

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(Added Step 3. Browsing the Copernicus Open Access Hub)
(Added Step 4. Installing Plugins for Qgis)
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:*You should now see a list of different images that fit your search criteria from above
 
:*You should now see a list of different images that fit your search criteria from above
 
:*Notice on the basemap the outline of each image footprint can be seen as a green outline
 
:*Notice on the basemap the outline of each image footprint can be seen as a green outline
[[File:Step3_Results.png|1000px]]
+
:::[[File:Step3_Results.png|1000px]]
 
:*When you hover your mouse over the images on the left of the screen the corresponding footprint will darken
 
:*When you hover your mouse over the images on the left of the screen the corresponding footprint will darken
 
:*Notice how the track of the satellite is broken down into multiple images, very often you will need to download multiple images to get the full coverage needed in a study site
 
:*Notice how the track of the satellite is broken down into multiple images, very often you will need to download multiple images to get the full coverage needed in a study site
Line 63: Line 63:
 
:*Notice each image has an associated name that quickly describes the image and some key pieces of information, here is a breakdown of the most important parts of the naming convention for Sentinel-2 data
 
:*Notice each image has an associated name that quickly describes the image and some key pieces of information, here is a breakdown of the most important parts of the naming convention for Sentinel-2 data
   
For example, you have the image…
+
:::For example, you have the image…
S2B_MSIL1C_20191010T145729_N0208_R082_T21UVQ_20191010T164326
+
:::'''S2B_MSIL1C_20191010T145729_N0208_R082_T21UVQ_20191010T164326'''
   
'''S2B:''' This is the mission ID and satellite that acquired the image (Seninel-2 using the Seninel-2B satellite)
+
:::'''S2B:''' This is the mission ID and satellite that acquired the image (Seninel-2 using the Seninel-2B satellite)
   
'''MSIL1C:''' This is the product level (Level-C1)
+
:::'''MSIL1C:''' This is the product level (Level-C1)
   
'''20191010T145729:''' This is the date and start time of acquisition (October 10th, 2019 at 14:57:29pm)
+
:::'''20191010T145729:''' This is the date and start time of acquisition (October 10th, 2019 at 14:57:29pm)
   
In addition to this each name acts as a unique identifier for the image
+
:::In addition to this each name acts as a unique identifier for the image
   
 
:*Find the two following images in the list of search results and click the '''Download''' [[File:Step3_Download_Icon.png|25px]] icon to download a zipfile of both images
 
:*Find the two following images in the list of search results and click the '''Download''' [[File:Step3_Download_Icon.png|25px]] icon to download a zipfile of both images
'''S2B_MSIL1C_20191010T145729_N0208_R082_T21UVQ_20191010T164326'''
+
:::'''S2B_MSIL1C_20191010T145729_N0208_R082_T21UVQ_20191010T164326'''
   
'''S2B_MSIL1C_20191010T145729_N0208_R082_T21UUQ_20191010T164326'''
+
:::'''S2B_MSIL1C_20191010T145729_N0208_R082_T21UUQ_20191010T164326'''
   
 
'''Note:''' if you are having trouble finding these two images, clear your selections in the search window then cut and paste the image name into the search bar to find each of the images one by one
 
'''Note:''' if you are having trouble finding these two images, clear your selections in the search window then cut and paste the image name into the search bar to find each of the images one by one
  +
  +
  +
===Step 4. Installing Plugins for Qgis===
  +
  +
:*Go to the folder where you downloaded the two images and extract both file folders
  +
:*Open Qgis
  +
:*On the top of your screen click on the '''Plugin''' tab
  +
:*A window of all the available plugins for Qgis should now appear
  +
:*Plugins are different tools created by the Qgis community that add additional functionality to the base Qgis software
  +
:*Search for and download the '''Value Tool''' plugin and the '''Virtual Raster Builder''' plugin
  +
:::[[File:Step4_InstallPlugin.png|1000px]]
  +
:*After the plugins are installed make sure they are enabled by clicking the checked box next to the tools name
   
 
== References ==
 
== References ==

Revision as of 17:59, 5 November 2019

Introduction

The delineation of shoreline polygons can have a variety of practical applications from shipping and navigation to change detection and mapping coastal erosion. Often shoreline shapefiles are created using a semi-automated method combining automated boundary extraction and manual interpretation. This tutorial will focus on delineating shoreline polygons and polylines from Seninel-2 satellite data using the Naturalized Difference Water Index [NDWI] to define the boundary between water and land. This boundary will then be extracted and manually corrected to produce a final shoreline polygon and polyline file.

The purpose of this tutorial is to show the user how to extract shoreline polygons from satellite data in the Qgis software package. For this tutorial the Copernicus Open Access Hub will be used to access the required satellite imagery. The report will explore how to use this data portal to brows and download the available Sentinel-2 imagery. The satellite imagery will then be imported in to Qgis where polygons and polylines of the shoreline will be created.

Both Qgis and the Copernicus Open Access Hub are free to use, however the Copernicus Open Access Hub does require the user to create an account to download the data. The latest version of Qgis can be downloaded from the following link: (https://www.qgis.org/en/site/ )


Note: QGIS version 3.8.1. was used to create this tutorial. A newer version of the software may be available.

Data

This report will use Sentine-2 satellite data collected by the European Space Agency. The Copernicus Sentinel-2 satellite mission is a constellation of two multispectral polar orbiting satellites [1]. The satellites offer data in the form of Level-1C and Level-2A data products. The Level-C1 products are multispectral satellite images that include the top of atmosphere reflectance. This means they do not have any atmospheric correction applied. Level-2A data products are derived from Level-1C data and offer bottom of atmosphere reflectance. In this case atmospheric corrections have been applied to the image to remove some effects of the atmosphere on the image’s reflectance [2]. It is worth noting that Level-2A data may not be offered for many regions outside of Europe. For this reason, the study will use Level-1C data.

Both the Level-1C and Level-2A data products have differing spatial resolutions depending on the multispectral bands being viewed. This study will use the Red, Green, Blue and NIR bands. All four of these bands have a spatial resolution of 10m with a swath width of 290m. In addition, when the data is downloaded it is projected in the relevant UTM zone using the WGS 83 datum [3].


Tutorial Methods and Instructions

Step 1. Using the Copernicus Open Access Hub

Click on the following link to access the Copernicus Open Access Hub: https://scihub.copernicus.eu/dhus/#/home

  • Click on the Login Step1 Copernicus Login Icon.png icon at the top right of the screen, create an account if you currently do not have an account or login to an existing account (Note: you cannot browse or download the data without creating an account)
  • After logging in you can now browse all of the data offered on the Copernicus Open Access Hub
  • To pan the field of view you can click and drag the underlying map you can also zoom in and out using your scroll wheel
  • You can change the basemap of the data portal by clicking on the Map Layers button on the top right of the screen

Step1 Copernicus MapLayers.png

  • You can click and drag the scroll wheel to manually draw a rectangle over your area of interest, when you do this a yellow box should appear over the area you selected (Note: if you click and drag the scroll wheel again you will draw a new area of interest and the previous one will be lost)
  • Zoom in to the city of Corner Brook, on the west coast of the island of Newfoundland, Canada
  • Click the scroll wheel and draw an area of interest encasing Cox’s Cove, the bay above Corner Brook as seen in the image below.

Step1 Copernicus AOI.png


Step 2. Browsing the Copernicus Open Access Hub

  • Click on the List Step2 Copernicus List Icon.png button on the left of the data search bar
  • You should now see an Advanced Search drop-down menu appear below the search bar as seen below

Step2 Copernicus SearchMenu.png

  • This menu will allow you to filter all of the data products offered by the data portal and allow you to search for specific criteria and date ranges
  • Under the Sort By header change the option to Sensing Date, this will show you all specified data products in order of when each image was taken
  • Under the Sensing Period header select the starting date October 1st 2019 on the left and the end date October 10th 2019 on the right (this will filter the search results to images that were taken on the date range specified)
  • Note: if you use the Ingestion Period option you will filter images based on the date they were added to the Copernicus Open Access Hub archive not when the images were taken
  • Check the box beside the Mission: Seninel-2 header to restrict all images to only the Seninel-2 satellites
  • Under the Product Type header in the Mission: Seninel-2 option select the S2MSI1C option, this will restrict all images to the Level-C1 product type
  • Note: using the Satellite Platform option will restrict the filtered images to the selected satellite from the Seninel-2 constellation
  • Note: using the Cloud Cover % option allows the user to specify what proportion of the image will be taken up by could cover, this can be useful to quickly filter out cloudy images from your search
  • Your search menu should look like the following

Step2 Copernicus SearchMenu Filled.png

  • After inputting these search options click the Search Step2 Copernicus Search Icon.png button


Step 3. Browsing the Copernicus Open Access Hub

  • You should now see a list of different images that fit your search criteria from above
  • Notice on the basemap the outline of each image footprint can be seen as a green outline
Step3 Results.png
  • When you hover your mouse over the images on the left of the screen the corresponding footprint will darken
  • Notice how the track of the satellite is broken down into multiple images, very often you will need to download multiple images to get the full coverage needed in a study site
  • Examine the different images available, you can click on the View Product Details Step3 ViewProduct Icon.png button to get a better look at the image you have selected
  • When you click the View Product Details Step3 ViewProduct Icon.png button you will be able to see additional information about the image, including the image footprint, time of acquisition and a variety of metadata
  • Notice each image has an associated name that quickly describes the image and some key pieces of information, here is a breakdown of the most important parts of the naming convention for Sentinel-2 data
For example, you have the image…
S2B_MSIL1C_20191010T145729_N0208_R082_T21UVQ_20191010T164326
S2B: This is the mission ID and satellite that acquired the image (Seninel-2 using the Seninel-2B satellite)
MSIL1C: This is the product level (Level-C1)
20191010T145729: This is the date and start time of acquisition (October 10th, 2019 at 14:57:29pm)
In addition to this each name acts as a unique identifier for the image
  • Find the two following images in the list of search results and click the Download Step3 Download Icon.png icon to download a zipfile of both images
S2B_MSIL1C_20191010T145729_N0208_R082_T21UVQ_20191010T164326
S2B_MSIL1C_20191010T145729_N0208_R082_T21UUQ_20191010T164326

Note: if you are having trouble finding these two images, clear your selections in the search window then cut and paste the image name into the search bar to find each of the images one by one


Step 4. Installing Plugins for Qgis

  • Go to the folder where you downloaded the two images and extract both file folders
  • Open Qgis
  • On the top of your screen click on the Plugin tab
  • A window of all the available plugins for Qgis should now appear
  • Plugins are different tools created by the Qgis community that add additional functionality to the base Qgis software
  • Search for and download the Value Tool plugin and the Virtual Raster Builder plugin
Step4 InstallPlugin.png
  • After the plugins are installed make sure they are enabled by clicking the checked box next to the tools name

References

[4] [5]

[6]

  1. [1],Retrieved: 2019-11-05
  2. [2],Retrieved: 2019-11-05
  3. [3],Retrieved: 2019-11-05
  4. [4],Sentinel-2, Retrieved: 2019-11-05
  5. [5],Data Products, Retrieved: 2019-11-05
  6. [6],Resolution and Swath, Retrieved: 2019-11-05